species:   Fugra
pid:       PID0994
parent:    FgmilR-7dps-28
paralog:   
locus:     NC_026474.1:9383055-9383117
matures:   ['UAUCGUAGAGCAUGCCCGGAGA', 'UCUGGUGUUUGCAGUAUU']
srr:       SRR6516243
genome:    /Users/jax/+Genomes/Fungal_genomes/Fugra.GCF_000240135.3_ASM24013v3_genomic.fa
alignment: /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516243.cram
call:      samtools view /media/data/njohnson/+SeqLibraries/FunHP_libraries/Zeng2018-ds.SRR6516243.cram NC_026474.1:9383055-9383117

0 out of bounds
3 alignments
1 proper strand
1 stranded perfect matches

     ****************************  ************************    
AGCGCAAUAUCGUAGAGCAUGCCCGGAGACAGAAUGCCGGCUCUGGUGUUUGCAGUAUUGGCU
(((.((((((.(((((.((...((((((.(........).))))))))))))).)))))))))
-------UAUCGUAGAGCAUGCCCGGAGA---------------------------------- l=22 a=0 c
-----------------------------------------UCUGGUGUUUGCAGUAUU---- l=18 a=0 c*
-------UAUCGUAGAGCAUGCCCGGAGACAGA------------------------------ l=26 a=1 ma
-------------------------------------CGGCUCUGGUGUUUGCAGUAUU---- l=22 a=0 ma*

-------UAUCGUAGAGCAUGCCCGGAGACAGA------------------------------ l=26 a=1 (ma)

mb-01011
ax-1001001
ku-01
ss-100010001000
fn-001
